References

A  B  C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

A

Aadland, L. P., Minnesota Department of Natural Resources, Stream Habitat Program. (2010). Reconnecting rivers. Natural channel design in dam removals and fish passage. St. Paul, MN: Author.

Abdul-Aziz, O. I., Wilson, B. N., & Gulliver, J. S. (2007). Calibration and validation of an empirical dissolved oxygen model. Journal of Environmental Engineering, 133(7), 698-710. https://doi.org/10.1061/(ASCE)0733-9372(2007)133:7(698)

Acreman, M., Hannaford, J., Mountford, O., Wood, P., Holmes, N., Cowx, I., Noble, R., Extence, C., Aldrick, J., King, J., Black, A. & Crookall, D. (2008). Developing Environmental Standards for Abstractions from UK Rivers to Implement the EU Water Framework Directive. Hydrological Sciences Journal 53: 1105- 1120.

Acreman, M.C., & Ferguson, A.J. D. (2010). Environmental flows and the European Water Framework Directive. Freshwater Biology 55 (1): 32-48. doi: 10.1111/j.1365-2427.2009.02181.x.

Adams, M. S., Ballin, U., Gaumert, T., Hale, B. W., Kausch, H., & Kruse, R. (2001). Monitoring selected indicators of ecological change in the Elbe River since the fall of the Iron Curtain. Environmental Conservation, 28(4), 333-344.

Adams, R. (2016). Pollution Sensitivity of Near-Surface Materials. Minnesota Department of Natural Resources, Division of Ecological Resources, County Geologic Atlas Program (Vol. HG-02).

Adams, S. M. & American Fisheries Society. (2002). Biological indicators of aquatic ecosystem stress. Bethesda, MD: American Fisheries Society.

Albert, D. a., & Minc, L. D. (2004). Plants as regional indicators of Great Lakes coastal wetland health. Aquatic Ecosystem Health & Management, 7(2), 233-247.

Alexander, R. B., Smith, R. A., Schwarz, G. E., Boyer, E. W., Nolan, J. V, & Brakebill, J. W. (2008). Differences in phosphorus and nitrogen delivery to The Gulf of Mexico from the Mississippi River basin, 42(3), 822-830.

Allan, J. D., Erickson, D. L., & Fay, J. (1997). The influence of catchment land use on stream integrity across multiple spatial scales. Freshwater Biology, 37(1), 149-161.

Allan, J. D. (2004). Influence of land use and landscape setting on the ecological status of rivers. Limnetica, 23(3-4), 187-198.

Allan, J. D., & Castillo, M. M. (2007). Stream ecology (2nd ed.). Dordrecht, Netherlands: Springer.

Alley, W. M., Reilly, T.E., & Franke, O. L. (1999). Sustainability of ground-water resources. Denver, CO: U.S. Dept. of the Interior, U.S. Geological Survey.

Amoros, C., Roux, A. L., Reygrobellet, J. L., Bravard, J. P., & Pautou, G. (1987). A method for applied ecological studies of fluvial hydrosystems. Regulated Rivers, 1, 17-36.

Annear, T., Chisholm, I., Beecher, H., Locke, A., Aarestad, P., Coomer, C., ... Stalnaker, C. (2002). Instream flows for riverine resource stewardship. Cheyenne, WY: In Stream Flow Council.

Armitage, P. D., Moss, D., Wright, J. F., & Furse, M. T. (1983). The performance of a new biological water quality score system based on macroinvertebrates over a wide range of unpolluted running-water sites. Water Research, 17(3), 333-347. https://doi.org/10.1016/0043-1354(83)90188-4

Auble, G. T., Friedman, J. M., & Scott, M. L. (1994). Relating riparian vegetation to present and future streamflows. Ecological Applications, 4(3), 544-554.

B

Barbash, J. E., Thelin, G. P., Kolpin, D. W., & Gilliom, R. J. (2001). Major herbicides in ground water: results from the national water-quality assessment. Journal of Environmental Quality, 30, 831-845.

Barr Engineering Company. (2004). Detailed Assessment of Phosphorus Sources to Minnesota Watersheds. Retrieved from http://www.pca.state.mn.us/index.php/water/water-monitoring-and-reporting/water-quality-and-pollutants/phosphorus/detailed-assessments-of-phosphorus-sources-to-minnesota-watersheds.html

Bartolino, J.R., & Cunningham, W. L.  (2003). Ground-water depletion across the nation. US Geological Survey Fact Sheet. 103-03. 4 pp.

Baxter-Potter, W. R., & Gillianiland, M. W. (1988). Bacterial pollution in runoff from agricultural lands. Journal of Environmental Quality, 17(1), 27-34. https://doi.org/10.2134/jeq1988.00472425001700010004x

Beechie, T.J., Pollock, M.M., Chan, S.S., and R. Bigley. (2005). Monitoring restoration of riparian forests. In Monitoring Stream and Watershed Restoration, (pp. 67-76). Bethesda, MD: American Fisheries Society.

Benke, A. C. (2001). Importance of flood regime to invertebrate habitat in an unregulated river-floodplain ecosystem. Journal of the North American Benthological Society, 20(2), 225-240.

Bicknell, B.R., Imhoff, J.C., Kittle, J.L., Donigian, A.S., & Johanson, R.C. Environmental Protection Agency, National Exposure Research Laboratory. (1997). Hydrological Simulation Program--Fortran, User's manual for version 11. Athens, GA: Author.

Bharati, L., Lee, K.-H., Isenhart, T. M., & Schultz, R. C. (2002). Soil-water infiltration under crops, pasture, and established riparian buffer in Midwestern USA. Agroforestry Systems, 56, 249-257. https://doi.org/10.1023/A:1021344807285

Birr, A. S., & Mulla, D. J. (2001). Evaluation of the phosphorus index in watersheds at the regional scale. Journal of Environmental Quality, 30(6), 2018-2025. https://doi.org/10.2134/jeq2001.2018

Blann, K., Frost Nerbonne, J., & Vondracek, B. (2002). Relationship of riparian buffer type to water temperature in the driftless area ecoregion of Minnesota. North American Journal of Fisheries Management, 22(2), 441-451. https://doi.org/10.1577/1548-8675(2002)022<0441:RORBTT>2.0.CO;2

Bledsoe, B. P., Brown, M. C., & Raff, D. a. (2007). GeoTools: A toolkit for fluvial system analysis. JAWRA Journal of the American Water Resources Association, 43(3), 757-772. https://doi.org/10.1111/j.1752-1688.2007.00060.x

Boody, G., Vondracek, B., Andow, D., Krinke, M., Westra, J., Zimmerman, J., & Welle, P. (2005). Multifunctional agriculture in the United States. BioScience, 55(1), 27-38. https://doi.org/10.1641/0006-3568(2005)055[0027:maitus]2.0.co;2

Booth, D. B., & Jackson, C. R. (1997). Urbanization of aquatic systems: Degradation thresholds, stormwater detection, and the limits of mitigation. JAWRA Journal of the American Water Resources Association, 33(5), 1077-1090. https://doi.org/10.1111/j.1752-1688.1997.tb04126.x

Booth, D. B. (2005). Challenges and prospects for restoring urban streams: a perspective from the Pacific Northwest of North America. Journal of the North American Benthological Society, 24(3), 724. https://doi.org/10.1899/0887-3593(2005)024\[0724:CAPFRU\]2.0.CO;2

Booth, D. T., Cox, S. E., & Simonds, G. (2007). Riparian monitoring using 2-cm GSD aerial photography. Ecological Indicators, 7(3), 636-648. https://doi.org/10.1016/j.ecolind.2006.07.005

Bouchard, R. W. Minnesota Pollution Control Agency, Environmental Analysis and Outcomes Division. (2016). Development of biological criteria for tiered aquatic life uses. St. Paul, MN.

Bovee, K. D., Lamb, B. L., Bartholow, J. M., Stalnaker, C. D., Taylor, J., & Hendricksen. J. (1998). Stream habitat analysis using the Instream Flow Incremental Methodology. Fort Collins, CO: U.S Geological Survey, Biological resources Division (Information and Technical Report USGS/BRD-1998-0004) 131.

Boykin, K. G., Kepner, W. G., Bradford, D. F., Guy, R. K., Kopp, D. A., Leimer, A. K., ? Gergely, K. J. (2013). A national approach for mapping and quantifying habitat-based biodiversity metrics across multiple spatial scales. Ecological Indicators, 33, 139?147.

Brainwood, M., Burgin, S., & Byrne, M. (2006). Is the decline of freshwater mussel populations in a regulated coastal river in south-eastern Australia linked with human modification of habitat? Aquatic Conservation: Marine and Freshwater Ecosystems, 16(5), 501-516. https://doi.org/10.1002/aqc.758

Brazner, J. C., Danz, N. P., Niemi, G. J., Regal, R. R., Trebitz, A. S., Howe, R. W., ... Sgro, G. V. (2007). Evaluation of geographic, geomorphic and human influences on Great Lakes wetland indicators: A multi-assemblage approach. Ecological Indicators, 7(3), 610-635. https://doi.org/10.1016/j.ecolind.2006.07.001

Bredhoeft, J., & Durbin, T. (2009). Ground water development – the time to full capture problem. Ground Water: 506-514.

Brezonik, P. L., Olmanson, L. G., Bauer, M. E., & Kloiber, S. M. (2007). Measuring water clarity and quality in Minnesota lakes and rivers: A census-based approach using remote-sensing techniques. Cura Reporter, 3-13. Retrieved from http://www.cura.umn.edu/sites/cura.advantagelabs.com/files/publications/37-2-Brezonik-et-al.pdf

Brierley, G. J., & Fryirs, K. (2000). River styles, a geomorphic approach to catchment characterization: Implications for river rehabilitation in Bega catchment, New South Wales, Australia. Environmental Management, 25(6), 661-679. https://doi.org/10.1007/s002670010052

Brinsmade, E., Christopherson, D., Gelbmann, L., Hansen, D., Heiskary, S., Hotka, L., ... Stoddard, D. Minnesota Pollution Control Agency (2007). Guidance Manual for Assessing the Quality of Minnesota Surface Waters, (Vol. wq-iw1-04). St. Paul, MN: Author.

Brooks, C. P. (2003). A scalar analysis of landscape connectivity. Oikos, 102(2), 433-439. https://doi.org/10.1034/j.1600-0579.2003.11511.x

Brown, L. R. & American Fisheries Society, Water Quality Section. (2005). Effects of urbanization on stream ecosystems. Bethesda, MD: American Fisheries Society.

Bryce, S. a. (2006). Development of a bird integrity index: Measuring avian response to disturbance in the Blue Mountains of Oregon, USA. Environmental Management, 38(3), 470-486. https://doi.org/10.1007/s00267-005-0152-z

Bunn, S. E., & Arthington, A. H. (2002). Basic principles and ecological consequences of altered flow regimes for aquatic biodiversity. Environmental Management, 30(4), 492-507. https://doi.org/10.1007/s00267-002-2737-0

Burkholder, J., Libra, B., Weyer, P., Heathcote, S., Kolpin, D., Thorne, P. S., & Wichman, M. (2007). Impacts of waste from concentrated animal feeding operations on water quality. Environmental Health Perspectives, 115(2), 308-312. https://doi.org/10.1289/ehp.8839

Burton, M. L., Samuelson, L. J., & Pan, S. (2005). Riparian woody plant diversity and forest structure along an urban-rural gradient. Urban Ecosystems, 8(1), 93-106. https://doi.org/10.1007/s11252-005-1421-6

Buseman, L., & Sands, G. University of Minnesota Extension Service. (2002). Agricultural Drainage: Issues and answers. St. Paul, MN: Author.

C

Campbell, K. L., Kumar, S., & Johnson, H. P. (1972). Stream straightening effects on flood-runoff characteristics. Trans. ASAE. Retrieved from http://agris.fao.org/agris-search/search.do?recordID=US201302285419

Cao, Y., Williams, D. D., & Williams, N. E. (1998). How important are rare species in aquatic community ecology and bioassessment? Limnology and Oceanography, 43(7), 1403-1409. https://doi.org/10.4319/lo.1998.43.7.1403

Cao, Y., Williams, D. D., & Williams, N. E. (1999). Data transformation and standardization in multivariate analysis of river water quality. Ecological Applications. https://doi.org/10.1890/1051-0761(1999)009[0669:DTASIT]2.0.CO;2

Caraco, N. F., Cole, J. J., Findlay, S. E. G., Fischer, D. T., Lampman, G. G., Pace, M. L., & Strayer, D. L. (2000). Dissolved oxygen declines in the Hudson River associated with the invasion of the zebra mussel (Dreissena polymorpha). Environmental Science and Technology, 34(7), 1204-1210. https://doi.org/10.1021/es990565z

Carlisle, D.M., Falcone, J., Wolock, D.M., Meador, M.R., & Norris, R.H. (2010). Predicting the natural flow regime: models for assessing hydrological alteration in streams. River Research and Applications 26: 118-136. doi: https://onlinelibrary.wiley.com/doi/abs/10.1002/rra.1247

Castelle, A.J., C. Conolly, M. Emers, E.D. Metz, S. Meyer, M. Witter, S. Mauermann, T. Erickson, S.S. Cooke. Adolfson Associates, Inc., Shorelands and Coastal Zone Management Program, Washington Department of Ecology. (1992). Wetland Buffers: Use and Effectiveness. (Pub. No. 92-10). Olympia, WA: Author.

Center for Watershed Protection. (2003). Impacts of Impervious Cover on Aquatic Systems. Watershed Protection Research Monograph, 1, 1-142.

Cesur, D. (2007). GIS as an information technology framework for water modeling. Journal of Hydroinformatics, 9(2), 123. https://doi.org/10.2166/hydro.2007.008

Chalfoun, A. D., Thompson, F. R., & Ratnaswamy, M. J. (2002). Nest predators and fragmentation: A review and meta-analysis. Conservation Biology, 16(2), 306-318. https://doi.org/10.1046/j.1523-1739.2002.00308.x

Chapin, F.S., Matson, P.A., and H.A. Mooney. (2002). Terrestrial water and energy balance. In Principles of Terrestrial Ecosystem Ecology, (pp. 71-96). New York, NY: Springer.

Chase, J. M. (2003). Community assembly: When should history matter? Oecologia, 136(4), 489-498. https://doi.org/10.1007/s00442-003-1311-7

Chescheir, G. M., Gilliam, J. W., Skaggs, R. W., & Broadhead, R. G. (1991). Nutrient and sediment removal in forested wetlands receiving pumped agricultural drainage water. Wetlands, 11(1), 87-103. https://doi.org/10.1007/BF03160842

Chirhart, J. Minnesota Pollution Control Agency, Environmental Analysis and Outcomes Division. (2014). Development of a macroinvertebrate based index of biological integrity for Minnesota’s rivers and streams. St. Paul, MN: Author.

Cho, J., Barone, V. A., & Mostaghimi, S. (2009). Simulation of land use impacts on groundwater levels and streamflow in a Virginia watershed. Agricultural Water Management, 96(1), 1-11. https://doi.org/10.1016/j.agwat.2008.07.005

Clausen, B., & Biggs, B. J. F. (1997). Relationships between benthic biota and hydrological indices in New Zealand streams. Freshwater Biology, 38(2), 327-342. https://doi.org/10.1046/j.1365-2427.1997.00230.x

Coats, R., Larsen, M., Heyvaert, A., Thomas, J., Luck, M., & Reuter, J. (2008). Nutrient and sediment production, watershed characteristics, and land use in the Tahoe Basin, California-Nevada. JAWRA Journal of the American Water Resources Association, 44(3), 754-770. https://doi.org/10.1111/j.1752-1688.2008.00203.x

D

Daily, G. C. (1997). Nature's Services: Societal Dependence on Natural Ecosystems. Washington, D.C.: Island Press.

Dalgleish, H. J., Kula, A. R., Hartnett, D. C., & Sandercock, B. K. (2008). Responses of two bunchgrasses to nitrogen addition in tallgrass prairie: The role of bud bank demography. American Journal of Botany, 95(6), 672-680. https://doi.org/10.3732/ajb.2007277

Dalzell, B. J., Gowda, P. H., & Mulla, D. J. (2004). Modeling sediment and phosphorus losses in an agricultural watershed to meet TMDLs. JAWRA Journal of the American Water Resources Association, 40, 533-543. https://doi.org/10.1111/j.1752-1688.2004.tb01048.x

Daniels, R. B., & Gilliam, J. W. (1996). Sediment and Chemical Load Reduction by Grass and Riparian Filters. Soil Science Society of America Journal, 60(1), 246.

Darveau, M., Beauchesne, P., Bélanger, L., Huot, J., & Larue, P. (1995). Riparian forest strips as habitat for birds in boreal forests. The Journal of Wildlife Management, 59(1), 67-78.

Davis, J. C. (1975). Minimal Dissolved Oxygen Requirements of Aquatic Life with Emphasis on Canadian Species: a Review. Journal of the Fisheries Research Board of Canada, 32(12), 2295-2332. https://doi.org/10.1139/f75-268

Davis, D. M., Gowda, P. H., Mulla, D. J., & Randall, G. W. (2000). Modeling nitrate nitrogen leaching in response to nitrogen fertilizer rate and tile drain depth or spacing for southern Minnesota, USA. Journal of Environmental Quality, 29(5), 1568-1581. https://doi.org/10.2134/jeq2000.00472425002900050026x

Davies, S. P., & Jackson, S. K. (2006). The Biological condition gradient: a descriptive model for interpreting change in aquatic ecosystems. Ecological Applications, 16(4), 1251-1266.

Delin, G. N., & Faltieisek, J. D. (2007). Ground-Water Recharge in Minnesota. USGS Fact Sheet, 2007-3002(January), 6.

Detenbeck, N. E., Johnston, C. A., & Niemi, G. J. (1993). Wetland effects on lake water quality in the Minneapolis/St. Paul metropolitan area. Landscape Ecology, 8(1), 39-61. https://doi.org/10.1007/BF00129866

Detenbeck, N. E., Batterman, S. L., Brady, V. J., Brazner, J. C., Snarski, V. M., Taylor, D. L., ... Arthur, J. W. (2000). A test of watershed classification system for ecological risk assessment. Environmental Toxicology, 19(19(4)), 1174-1181.

Detenbeck, N. E., Elonen, C. M., Taylor, D. L., Anderson, L. E., Jicha, T. M., & Batterman, S. L. (2003). Effects of hydrogeomorphic region, catchment storage and mature forest on baseflow and snowmelt stream water quality in second-order Lake Superior Basin tributaries. Freshwater Biology, 48(5), 912-927. https://doi.org/10.1046/j.1365-2427.2003.01056.x

Detenbeck, N. E., Brady, V. J., Taylor, D. L., Snarski, V. M., & Batterman, S. L. (2005). Relationship of stream flow regime in the western Lake Superior basin to watershed type characteristics. Journal of Hydrology, 309(1-4), 258-276. https://doi.org/10.1016/j.jhydrol.2004.11.024

Diebel, M., Fedora, M., & Cogswell, S. (2009). Prioritizing road crossing improvement to restore stream connectivity for stream-resident fish. Proceedings of The International Conference on Ecology and Transportation. Duluth, MN.

Dolph, C. L., Huff, D. D., Chizinski, C. J., & Vondracek, B. (2011). Implications of community concordance for assessing stream integrity at three nested spatial scales in Minnesota, U.S.A. Freshwater Biology, 56(8), 1652-1669. https://doi.org/10.1111/j.1365-2427.2011.02589.x

Dudgeon, D. (2005). River management for conservation of freshwater biodiversity in monsoonal Asia. Ecology and Society, 10(2), 15. Retrieved from www.ecologyandsociety.org/vol10/iss2/art15/

Dunne, T., & Leopold, L.B. (1978). Water in Environmental Planning. (pp. 818) New York, NY: W. H. Freeman and Company.

E

Ekasingh, B., & Letcher, R. A. (2008). Successes and failures to embed socioeconomic dimensions in integrated natural resource management modeling: Lessons from Thailand. Mathematics and Computers in Simulation, 78(2-3), 137-145. https://doi.org/http://dx.doi.org/10.1016/j.matcom.2008.01.006

F

Farahmand, T., Fleming, S. W., & Quilty, E. J. (2007). Detection and visualization of storm hydrograph changes under urbanization: An impulse response approach. Journal of Environmental Management, 85(1), 93-100. https://doi.org/10.1016/j.jenvman.2006.08.004

Fetter, C.W. (2001). Soil permeability. In Applied Hydrogeology (4th ed.). London, England: Pearson Education.

Fitch, L., & Ambrose, N. (2003). Riparian areas: A user’s guide to health. Lethbridge, Alberta: Cows and Fish Program.

Fitzpatrick, F. A., Knox, J.C., & Whitman, H.E. United States Geological Survey, Water Resources Division. (1999). Effects of historical land-cover changes on flooding and sedimentation, North Fish Creek, Wisconsin. (Vol. 99-4083). Middleton, WI: Author.

Fleming, S. W., & Quilty, E. J. (2007). Toward a practical method for setting screening-level, ecological risk-based water temperature criteria and monitoring compliance. Environmental Monitoring and Assessment, 131(1-3), 83-94. https://doi.org/10.1007/s10661-006-9458-4

Flinders, C. A., Horwitz, R. J., & Belton, T. (2008). Relationship of fish and macroinvertebrate communities in the mid-Atlantic uplands: Implications for integrated assessments. Ecological Indicators, 8(5), 588-598. https://doi.org/10.1016/j.ecolind.2007.08.004

Flynn, D. F. B., Gogol-Prokurat, M., Nogeire, T., Molinari, N., Richers, B. T., Lin, B. B., ... DeClerck, F. (2009). Loss of functional diversity under land use intensification across multiple taxa. Ecology Letters, 12(1), 22-33. https://doi.org/10.1111/j.1461-0248.2008.01255.x

Fox, D. M., & Bryan, R. B. (2000). The relationship of soil loss by interrill erosion to slope gradient. Catena, 38(3), 211-222. https://doi.org/10.1016/S0341-8162(99)00072-7

Frappier, B., & Eckert, R. T. (2007). A new index of habitat alteration and a comparison of approaches to predict stream habitat conditions. Freshwater Biology, 52(10), 2009-2020. https://doi.org/10.1111/j.1365-2427.2007.01803.x

Freeman, M. C., Bowen, Z. H., Bovee, K. D., & Irwin, E. R. (2001). Flow and habitat effects on juvenile fish abundance in natural and altered flow regimes. Ecological Applications, 11(1), 179-190.

Friesen, L. E., Eagles, P. F., & Mackay, R. J. (1995). Effects of residential development on forest-dwelling neotropical migrant songbirds. Conservation Biology, 9(6), 1408-1414. https://doi.org/10.1046/j.1523-1739.1995.09061408.x

G

Gagné, F., Blaise, C., André, C., Gagnon, C., & Salazar, M. (2007). Neuroendocrine disruption and health effects in Elliptio complanata mussels exposed to aeration lagoons for wastewater treatment. Chemosphere, 68(4), 731-743. https://doi.org/10.1016/j.chemosphere.2006.12.101

Galatowitsch, S. M., Whited, D. C., Lehtinen, R., Husveth, J., & Schik, K. (2000). The vegetation of wet meadows in relation to their land-use. Environmental Monitoring and Assessment, 60(2), 121-144.

Gary, H. L., Johnson, S. R., & Ponce, S. L. (1983). Cattle grazing impact on surface water-quality in a Colorado Front Range stream. Journal of Soil and Water Conservation, 38(2), 124-128.

Gaston, K. J. (2000). Global patterns in biodiversity. Nature, 405, 220-227.

Genet, J. a., & Olsen, A. R. (2008). Assessing depressional wetland quantity and quality using a probabilistic sampling design in the Redwood River watershed, Minnesota, USA. Wetlands, 28(2), 324-335.

Gergel, S. E., Turner, M. G., & Kratz, T. K. (1999). Dissolved Organic Carbon as an Indicator of the Scale of Watershed Influence on Lakes and Rivers. Ecological Applications, 9(4), 1377-1390. https://doi.org/10.2307/2641403

Gergel, S. E., Turner, M. G., Miller, J. R., Melack, J. M., & Stanley, E. H. (2002). Landscape indicators of human impacts to riverine systems. Aquatic Sciences, 64(2), 118-128. https://doi.org/10.1007/s00027-002-8060-2

Gibbs, J. P. (2011). Loss and Biodiversity Conservation. Conservation Biology, 14(1), 314-317. https://doi.org/10.1007/s10531-011-0010-7

Gibson, J. J., Sadek, M. a, Stone, D. J. M., Hughes, C. E., Hankin, S., Cendon, D. I., & Hollins, S. E. (2008). Evaporative isotope enrichment as a constraint on reach water balance along a dryland river. Isotopes in Environmental and Health Studies, 44(1), 83-98.

Goetz, S. J., Wright, R. K., Smith, A. J., Zinecker, E., & Schaub, E. (2003). IKONOS imagery for resource management: Tree cover, impervious surfaces, and riparian buffer analyses in the mid-Atlantic region. Remote Sensing of Environment, 88(1-2), 195-208. https://doi.org/10.1016/j.rse.2003.07.010

Goetz, S. J., Jantz, C. A., Towe, C. A., Bockstael, N. (2007). Modeling the urbanization process across Maryland in the context of Chesapeake Bay restoration. Conference paper from 06 Smart Growth @ 10. College Park, MD.

Goldstein, R. M., Meador, M. R., & Ruhl, K. E. (2007). Relative influence of streamflows in assessing temporal variability in stream habitat. JAWRA Journal of the American Water Resources Association, 43(3), 642-650. https://doi.org/10.1111/j.1752-1688.2007.00051.x

Gordon, N. D., McMahon, T. A., & Finlayson, B. L. (1992). Stream Hydrology. John Wiley and Sons, Chichester, England.

Gore, J. A., Layzer, J. B., & Mead, J. (2001). Macroinvertebrate instream flow studies after 20 years: A role in stream management and restoration. Regulated Rivers-Research & Management, 17(4-5), 527-542. https://doi.org/10.1002/rrr.650

Gorman, O. T., & Karr, J. R. (1978). Habitat structure and stream fish communities. Ecology, 59(3), 507-515.

Government of Saskatchewan, Saskatchewan Watershed Authority. (2007). State of the watershed report. Regina, Saskatchewan: Author.

Gowda, P. H., Mulla, D. J., & Dalzell, B. J. (2003). Examining the targeting of conservation tillage practices to steep vs. flat landscapes in the Minnesota River Basin. Journal of Soil and Water Conservation, 58(1), 53-57.

Graham, A. A. (1990). Siltation of stone-surface periphyton in rivers by clay-sized particles from low concentrations in suspension. Hydrobiologia, 199(2), 107-115. https://doi.org/10.1007/BF00005603

Gran, K., Belmont, P., Bevis, M., Cho, S. J., Heitkamp, B., Hobbs, B., ... Wilcock, P. (2016). Collaborative for Sediment Source Reduction : Greater Blue Earth River Basin. St. Paul, MN: Minnesota Department of Agriculture.

Gray, E. van S., & Stauffer, J. R. (1999). Comparative microhabitat use of ecologically similar benthic fishes. Environmental Biology of Fishes, 56, 443-453. https://doi.org/10.1023/A

Grenouillet, G., Brosse, S., Tudesque, L., Lek, S., Baraillé, Y., & Loot, G. (2008). Concordance among stream assemblages and spatial autocorrelation along a fragmented gradient. Diversity and Distributions, 14(4), 592-603. https://doi.org/10.1111/j.1472-4642.2007.00443.x

Groffman, P. M., & Crawford, M. K. (2003). Denitrification potential in urban riparian zones. Journal of Environmental Quality, 32(3), 1144-1149. https://doi.org/10.2134/jeq2003.1144

H

Ha, S., & Stenstrom, M. (2008). Predictive Modeling of Storm-Water Runoff Quantity and Quality for a Large Urban Watershed. Journal of Environmental Engineering, 134(9), 703-711. https://doi.org/10.1061/(ASCE)0733-9372(2008)134:9(703)

Haase, R., & Nolte, U. (2008). The invertebrate species index (ISI) for streams in southeast Queensland, Australia. Ecological Indicators, 8(5), 599-613. https://doi.org/10.1016/j.ecolind.2007.08.005

Hall, L. W., & Killen, W. D. (2006). Historical assessments and comparisons of benthic communities and physical habitat in two agricultural streams in California’s San Joaquin watershed. Journal of Environmental Science and Health. 41(11), 2635-2664. https://doi.org/10.1080/10934520600928094

Hamill, L. (1999). Bridge Hydraulics. London, England: E & FN Spon.

Hancock, G. R., Nuake, J., & Fityus, S. G. (2006). Modelling of sediment dynamics in a laboratory-scale experimental catchment. Hydrological Processes, 20(1), 67-84. https://doi.org/10.1002/hyp.5899

Hanson, M. A., Zimmer, K. D., Butler, M. G., Tangen, B. A., Herwig, B. R., & Euliss, N. H. (2005). Biotic interactions as determinants of ecosystem structure in prairie wetlands: An example using fish. Wetlands, 25(3), 764-775. https://doi.org/10.1672/0277-5212(2005)025[0764:BIADOE]2.0.CO;2

Harding, J. S., Benfield, E. F., Bolstad, P. V, Helfman, G. S., & Jones, E. B. (1998). Stream biodiversity: the ghost of land use past. Proceedings of the National Academy of Sciences of the United States of America, 95(25), 14843-14847. https://doi.org/10.1073/pnas.95.25.14843

Hawkins, C. P., Norris, R. H., Hogue, J. N., & Feminella, J. W. (2000). Development and evaluation of predictive models for measuring the biological integrity of streams. Ecological Applications, 10(5), 1456. https://doi.org/10.1890/1051-0761(2000)010{[}1456:DAEOPM]2.0.CO;2

Hayes, T. B., Collins, A., Lee, M., Mendoza, M., Noriega, N., Stuart, a A., & Vonk, A. (2002). Hermaphroditic, demasculinized frogs after exposure to the herbicide atrazine at low ecologically relevant doses. Proceedings of the National Academy of Sciences of the United States of America, 99(8), 5476-80. https://doi.org/10.1073/pnas.082121499

Hecnar, S. J. (2004). Great Lakes wetlands as amphibian habitats: A review. Aquatic Ecosystem Health & Management, 7(2), 289-303. https://doi.org/10.1080/14634980490461542

Heede, B.H. U.S. Department of Agriculture, U.S. Forest Service. (1992). Stream dynamics: an overview for land managers. Rocky Mountain Forest and Range Experiment Station General Technical Report RM-72. Washington, D.C.: Author.

Heilman, G. E., Strittholt, J. R., Slosser, N. C., & Dellasala, D. a. (2002). Forest Fragmentation of the Conterminous United States: Assessing Forest Intactness through Road Density and Spatial Characteristics. Bioscience, 52(5), 411-422. https://doi.org/10.1641/0006-3568(2002)052[0411:ffotcu]2.0.co;2

Heiskary, S., & Wilson, B. (2008). Minnesota’s approach to nutrient criteria development. Lake and Reservoir Management, 24(3), 282-297. https://doi.org/10.1080/07438140809354068

Herlihy, A. T., Kaufmann, P. R., Mitch, M. E., & Brown, D. D. (1990). Regional estimates of acid mine drainage impact on streams in the mid-Atlantic and Southeastern United States. Water, Air, and Soil Pollution, 50(1-2), 91-107. https://doi.org/10.1007/BF00284786

Herrick, J. E., Brown, J. R., Tugel, A. J., Shaver, P. L., & Havstad, K. M. (2002). Application of soil quality to monitoring and Management : paradigms from rangeland ecology. Agronomy Journal, 11, 3-11.

Herzon, I., & Helenius, J. (2008). Agricultural drainage ditches, their biological importance and functioning. Biological Conservation, 141(5), 1171-1183. https://doi.org/10.1016/j.biocon.2008.03.005

Hession, W. C., Pizzuto, J. E., Johnson, T. E., & Horwitz, R. J. (2003). Influence of bank vegetation on channel morphology in rural and urban watersheds. Geology, 31(2), 147-150. https://doi.org/10.1130/0091-7613(2003)031<0147:IOBVOC>2.0.CO;2

Hey, D.L., & Philippi, N.S. (1997). Reinventing a flood control strategy. In Proceedings of the Scientific Assessment and Strategy Team workshop on hydrology, ecology and hydraulics.

Hey, D.L., & Philippi, N.S. (1999). A case for wetland restoration. New York, NY: John Wiley & Sons.

Highways Agency. (1994). The Design of Highway and Bridges for Hydraulic Action. In Design Manual for Roads and Bridges. London, England: Author.

Hill, A. B. (1965). The Environment and Disease: Association or Causation?. Proceedings of the Royal Society of Medicine. 58(5): 295–300.

Hooper, D. U., Chapin, F. S., Ewel, J. J., Hector, A., Inchausti, P., Lavorel, S., ... Wardle, D. A. (2005). Effects of biodiversity on ecosystem functioning: A consensus of current knowledge. Ecological Monographs, 75(1), 3-35. https://doi.org/10.1890/04-0922

Horwitz, R. J., Johnson, T. E., Overbeck, P. F., O’Donnell, T. K., Hession, W. C., & Sweeney, B. W. (2008). Effects of riparian vegetation and watershed urbanization on fishes in streams of the mid-Atlantic piedmont (USA). JAWRA Journal of the American Water Resources Association, 44(3), 724-741. https://doi.org/10.1111/j.1752-1688.2008.00201.x

Hughes, R. M., Wang, L., & Seelbach, P. W. (Eds.). (2006). Landscape influences on stream habitats and biological assemblages. Bethesda, MD: American Fisheries.

Horwitz, R. (1978). Temporal variability patterns and the distributional patterns of stream fishes. Ecological Monographs, 48(3), 307-321. https://doi.org/10.2307/2937233

Hupp, C. R., & Osterkamp, W. R. (1985). Bottomland vegetation distribution along Passage Creek, Virginia, in relation to fluvial landforms. Ecology, 66(3), 670-681.

Hupp, C. R., & Osterkamp, W. R. (1996). Riparian vegetation and fluvial geomorphic processes. Geomorphology, 14, 277-295. https://doi.org/10.1016/0169-555X(95)00042-4

I

Inglis, C.C. U.S. Army Corp of Engineers, Waterways Experiment Station. (1949). The behavior and control of rivers and canals. Vicksburg, MS: Author.

J

Jackson, D. A., Peres-Neto, P. R., & Olden, J. D. (2001). What controls who is where in freshwater fish communities - the roles of biotic, abiotic, and spatial factors. Can. J. Fish. Aquat. Sci., 58, 157-170. https://doi.org/10.1139/cjfas-58-1-157

Jaworski, N. A. (1993). The application of the ecotone concept in defining nutrient management requirements for the upper Potomac River basin. Hydrobiologia, 251(1-3), 341-349. https://doi.org/10.1007/BF00007193

Jefferson, A., Nolin, A., Lewis, S., & Tague, C. (2008). Hydrogeologic controls on streamflow sensitivity to climate variation. Hydrological Processes, 22(22), 4371-4385. https://doi.org/10.1002/hyp.7041

Jelks, H. L., Walsh, S. J., Burkhead, N. M., Contreras-Balderas, S., Diaz-Pardo, E., Hendrickson, D. A., ... Jr, M. L. W. (2011). Conservation status of imperiled North American freshwater and diadromous fishes. Fisheries, 3(8), 372-407. https://doi.org/10.1577/1548-8446-33.8.372

Jenks, G. F., & Caspall, F. C. (1971). Error on choroplethic maps: definition, measurement, reduction. Annals of the Association of American Geographers, 61(2), 217-244.

Johnes, P., Moss, B., & Phillips, G. (1996). The determination of total nitrogen and total phosphorus concentrations in freshwaters from land use, stock headage and population data: testing of a model for use in conservation and water quality management. Freshwater Biology, 36, 451-473. https://doi.org/10.1046/j.1365-2427.1996.00099.x

Johnson, L., Richards, C., Host, G., & Arthur, J. (1997). Landscape influences on water chemistry in Midwestern stream ecosystems. Freshwater Biology, 37(1), 193-208. https://doi.org/doi:10.1046/j.1365-2427.1997.d01-539.x

Johnston, C. A., Bridgham, S. D., & al, et. (2001). Nutrient dynamics in relation to geomorphology of riverine wetlands. Soil Sci. Soc. Am. J, 65(2), 557-577. https://doi.org/10.2136/sssaj2001.652557x

Johnston, C.A., J.P. Schubauer-Berigan, and S.D. Bridgham. (1997). The potential role of riverine wetlands as buffer zones. In N.E. Haycock et al. (ed.) Buffer zones: Their processes and potential in water protection. (pp. 155-170). Quest Environmental, Harpenden, Herts, UK.

Jones, E. B. D., Helfman, G. S., Harper, J. O., & Bolstad, P. V. (1999). Effects of riparian forest removal on fish assemblages in Southern Appalachian streams. Conservation Biology, 13(6), 1454-1465.

Jones, K. B., Neale, A. C., Nash, M. S., Van Remortel, R. D., Wickham, J. D., Riitters, K. H., & O’neill, R. V. (2001). Predicting nutrient and sediment loadings to streams from landscape metrics: A multiple watershed study from the United States Mid-Atlantic Region. Landscape Ecology, 16(4), 301-312. https://doi.org/10.1023/A:1011175013278

Junk, W. J., Bayley, P. B., & Sparks, R. E. (1989). The flood pulse concept in river-floodplain systems. Canadian Special Publication of Fisheries and Aquatic Sciences. https://doi.org/10.1371/journal.pone.0028909

K

Kapo, K. E., & Burton, G. A. (2006). A geographic information systems-based, weights-of-evidence approach for diagnosing aquatic ecosystem impairment. Environmental Toxicology and Chemistry, 25(8), 2237-2249. https://doi.org/Doi 10.1897/05-534r.1

Karr, J. R., & Schlosser, I. J. (1978). Water Resources and the Land-Water Interface. Science, 201, 229-234. https://doi.org/10.1126/science.201.4352.229

Karr, J. R. (1981). Assessment of Biotic Integrity Using Fish Communities. Fisheries, 6(6), 21-27. https://doi.org/10.1577/1548-8446(1981)006<0021:AOBIUF>2.0.CO;2

Keller, C. M. E., Robbins, C. S., & Hatfield, J. S. (1993). Avian communities in riparian forests of different widths in Maryland and Delaware. Wetlands, 13(2), 137-144.

Kilgour, B. W., & Barton, D. R. (1999). Associations between stream fish and benthos across environmental gradients in southern Ontario, Canada. Freshwater Biology, 41(3), 553-566. https://doi.org/10.1046/j.1365-2427.1999.00402.x

Knox, J. C. (1977). Human impacts on wisconsin stream channels. Annals of the Association of American Geographers, 67(3), 323-342. https://doi.org/10.1111/j.1467-8306.1977.tb01145.x

Knutson, M. G., Richardson, W. B., Reineke, D. M., Gray, B. R., Parmelee, J. R., & Weick, S. E. (2004). Agricultural ponds support amphibian populations. Ecological Applications, 14(3), 669-684. https://doi.org/10.1890/02-5305

Kondolf, G. M. (1997). Hungry water: Effects of dams and gravel mining on river channels. Environmental Management, 21(4), 533-551. https://doi.org/10.1007/s002679900048

Kondolf, G. M., Boulton, A. J., O’Daniel, S., Poole, G. C., Rahel, F. J., Stanley, E. H., ... Nakamura, K. (2006). Process-based ecological river restoration: Visualizing three-dimensional connectivity and dynamic vectors to recover lost linkages. Ecology and Society, 11(2). https://doi.org/5

Kovacic, D. A., Twait, R. M., Wallace, M. P., & Bowling, J. M. (2006). Use of created wetlands to improve water quality in the Midwest-Lake Bloomington case study. Ecological Engineering, 28(3 SPEC. ISS.), 258-270. https://doi.org/10.1016/j.ecoleng.2006.08.002

Kröger, R., Holland, M. M., Moore, M. T., & Cooper, C. M. (2008). Agricultural drainage ditches mitigate phosphorus loads as a function of hydrological variability. Journal of Environmental Quality, 37(1), 107-13. https://doi.org/10.2134/jeq2006.0505

Krysel, C., Boyer, E. M., Parson, C., & Welle, P. (2003). Lakeshore property values and water quality: evidence from property sales in the Mississippi headwaters region. Brainerd, MN. Retrieved from http://www.friendscvsf.org/bsu_study.pdf

L

Ladson, A. R., White, L. J., Doolan, J. a., Finlayson, B. L., Hart, B. T., Lake, P. S., & Tilleard, J. W. (1999). Development and testing of an Index of Stream Condition for waterway management in Australia. Freshwater Biology, 41(2), 453-468.

Lammert, M., & Allan, J. D. (1999). Assessing Biotic Integrity of Streams : Effects of Scale in Measuring the Influence of Land Use / Cover and Habitat Structure on Fish and Macroinvertebrates. Environmental Management, 23(2), 257-270.

Landis, W. G. (2003). Twenty years before and hence; ecological risk assessment at multiple scales with multiple stressors and multiple endpoints. Human and Ecological Risk Assessment, 9, 1317-1326.

Lane, E.W. (1955). The importance of fluvial morphology in hydraulic engineering. Proceedings of the American Society of Civil Engineers 81:745:1-17.

Lee, K. H., Isenhart, T. M., & Schultz, R. C. (2003). Sediment and nutrient removal in an established multi-species riparian buffer. Journal of Soil and Water Conservation, 58(1), 1-8.

Lehtinen, R. M., Galatowitsch, S. M., & Tester, J. R. (1999). Consequences of habitat loss and fragmentation for wetland amphibian assemblages. Wetlands, 19(1), 1-12. https://doi.org/10.1007/BF03161728

Leopold, L. B., Wolman, M. G., & Miller, J. P. (1964). Fluvial processes in geomorphology. San Francisco, CA: W. H. Freeman and Company. https://doi.org/10.1016/0022-1694(65)90101-0

Leopold, L. B. (1994). Flood hydrology and the floodplain. In G. F. White and M. F. Myers, (Eds.) Water Resources Update: Coping with the Flood: The Next Phase, (pp. 11-14). Carbondale, IL: The University Council on Water Resources.

Leuthe, D., Leete, J., Loughry, J., Sehl, J., Pierce, A., Wright, D., ... Barnes, F. (2010). Long-Term Protection of the State’s Surface Water and Groundwater Resources. St. Paul, MN: Minnesota Department of Natural Resources.

Levenson, J.B. (1981). Woodlots as biogeographic islands in southeastern Wisconsin. In R.L. Burgess & D.M. Sharpe (Eds.), Forest Island Dynamics in Man Dominated Landscapes, (pp. 13-39). New York, NY: Springer-Verlag.

Lin, Y.-P., Lin, Y.-B., Wang, Y.-T., & Hong, N.-M. (2008). Monitoring and Predicting Land-use Changes and the Hydrology of the Urbanized Paochiao Watershed in Taiwan Using Remote Sensing Data, Urban Growth Models and a Hydrological Model. Sensors, 8(2), 658-680. https://doi.org/10.3390/s8020658

Lindstrom, M. J., Schumacher, T. E., & Blecha, M. L. (1998). Tillage effects on water runoff and soil erosion after sod. Journal of Soil and Water Conservation, 53(1), 59-63.

Liu, Z. J., Weller, D. E., Jordan, T. E., Correll, D. L., & Boomer, K. B. (2008). Integrated modular modeling of water and nutrients from point and nonpoint sources in the Patuxent River watershed. JAWRA Journal of the American Water Resources Association, 44(3), 700-723. https://doi.org/10.1111/j.1752-1688.2008.00200.x

Locantore, N. W., Tran, L. T., O’Neill, R. V., McKinnis, P. W., Smith, E. R., & O’Connell, M. (2004). An overview of data integration methods for regional assessment. Environmental Monitoring and Assessment, 94, 249-261.

Loreau M., Naeem S., Inchausti P., Bengtsson J., Grime J. P., Hector A., ... Wardle D. A. (2001). Biodiversity and ecosystem functioning: current knowledge and future challenges. Science, 294(2001), 804-808. https://doi.org/10.1126/science.1064088

Loreau, M., Mouquet, N., & Holt, R. D. (2003). Meta-ecosystems: A theoretical framework for a spatial ecosystem ecology. Ecology Letters, 6(8), 673-679. https://doi.org/10.1046/j.1461-0248.2003.00483.x

Lorenz, D. L., & Delin, G. N. (2007). A regression model to estimate regional ground water recharge. Ground Water, 45(2), 196-208. https://doi.org/10.1111/j.1745-6584.2006.00273.x

Lussier, S. M., da Silva, S. N., Charpentier, M., Heltshe, J. F., Cormier, S. M., Klemm, D. J., ... Jayaraman, S. (2008). The influence of suburban land use on habitat and biotic integrity of coastal Rhode Island streams. Environmental Monitoring and Assessment, 139(1-3), 119-136. https://doi.org/10.1007/s10661-007-9820-1

Lyons, J., Wang, L., & Simonson, T. D. (1996). Development and Validation of an Index of Biotic Integrity for Coldwater Streams in Wisconsin. North American Journal of Fisheries Management, 16(2), 241-256. https://doi.org/10.1577/1548-8675(1996)016<0241:DAVOAI>2.3.CO;2

Lyons, J. (2006). A fish-based index of biotic integrity to assess intermittent headwater streams in Wisconsin, USA. Environmental Monitoring and Assessment, 122(1-3), 239-258. https://doi.org/10.1007/s10661-005-9178-1

Lytle, D., & Poff, N. (2004). Adaptation to natural flow regimes. Trends in Ecology & Evolution, 19(2), 94-100. https://doi.org/10.1016/j.tree.2003.10.002

M

Maes, D., Bauwens, D., De Bruyn, L., Anselin, A., Vermeersch, G., Van Landuyt, W., ... Gilbert, M. (2005). Species richness coincidence: Conservation strategies based on predictive modelling. Biodiversity and Conservation, 14(6), 1345-1364. https://doi.org/10.1007/s10531-004-9662-x

Mason, N. W. H., Mouillot, D., Lee, W. G., & Wilson, J. B. (2005). Functional richness, functional evenness and functional divergence: The primary components of functional diversity. Oikos, 111(1), 112-118. https://doi.org/10.1111/j.0030-1299.2005.13886.x

Marchant, R., Hirst, A., Norris, R. H., Butcher, R., Metzeling, L., & Tiller, D. (1997). Classification and Prediction of Macroinvertebrate Assemblages from Running Waters in Freshwater. Journal of the North American Benthological Society, 16(3), 664-681.

Mathews, R., & Richter, B. D. (2007). Application of the indicators of hydrologic alteration software in environmental flow setting. JAWRA Journal of the American Water Resources Association, 43(6), 1400-1413. https://doi.org/10.1111/j.1752-1688.2007.00099.x

Mattsson, B. J., & Niemi, G. J. (2006). Factors influencing predation on ovenbird (Seiurus aurocapilla) nests in northern hardwoods: Interactions across spatial scales. The Auk, 123(1), 82-96.

Mayer, P. M., Reynolds, S. K., McCutchen, M. D., & Canfield, T. J. (2007). Meta-analysis of nitrogen removal in riparian buffers. Journal of Environmental Quality, 36(4), 1172-1180. https://doi.org/10.2134/jeq2006.0462

McBride, M., & Booth, D. B. (2005). Urban Impacts on Physical Stream Condition: Effects of Spatial Scale, Connectivity, and Longitudinal Trends. JAWRA Journal of The American Water Resources Association, 41(3), 565-580. https://doi.org/10.1111/j.1752-1688.2005.tb03755.x

Meffe, G. K., & Carroll, C. R. (1997). Conservation reserves in heterogeneous landscapes. In G.K. Meffe and C.R. Carroll and contributors (Eds.), Principles of conservation biology, (2nd ed.), (pp. 305-343). Sunderland, MA: Sinauer Associates.

Meffe, G. K., & Sheldon, A. L. (1988). The Influence of Habitat Structure on Fish Assemblage Composition in Southeastern Blackwater Streams. American Midland Naturalist, 120(2), 225-240. https://doi.org/10.2307/2425994

Metcalfe-Smith, J. L., Staton, S. K., Mackie, G. L., & Lane, N. M. (1998). Changes in the biodiversity of freshwater mussels in the Canadian waters of the lower Great Lakes drainage basin over the past 140 years. Journal of Great Lakes Research, 24(4), 845-858. https://doi.org/10.1016/S0380-1330(98)70866-4

Millennium Ecosystem Assessment (Program). (2005). Ecosystems and human well-being. Washington, D.C: Island Press.

Miller, J. E., & Frink, D. L. (1984). Changes in flood response of the Red River of the North basin, North Dakota-Minnesota. United States Geological Survey Water-Supply Paper 2243. Retrieved from http://www.csa.com/partners/viewrecord.php?requester=gs&collection=ENV&recid=9000194

Minnesota Department of Natural Resources, Division of Ecological and Water Resources. (2004). Healthy rivers: A water course. Retrieved from www.mndnr.gov/healthyrivers/index.html

Minnesota Department of Natural Resources, Division of Ecological and Water Resources. (2006). Tomorrow’s habitat for the wild & rare, an action plan for Minnesota wildlife, comprehensive wildlife conservation strategy. St. Paul, MN: Author.

Minnesota Department of Natural Resources, Division of Ecological and Water Resources. (2009). Mussel Survey Decision Tree. St. Paul, MN: Author.

Minnesota Department of Natural Resources, Division of Ecological and Water Resources. (2016). Minnesota’s Wildlife Action Plan 2015-2025. St. Paul, MN: Author.

Minnesota Department of Natural Resources. (2004). A Quick Guide to Using Natural Resource Information. St. Paul, MN. Retrieved from https://files.dnr.state.mn.us/assistance/nrplanning/community/nrig/brochure

Minnesota Pollution Control Agency, Environmental Outcomes Division. (2007). Guidance Manual for assessing the quality of Minnesota surface waters for determination of impairment, 305(b) report and 303(d) list. St.Paul, MN: Author.

Mitsch, W. J., & Day, J. W. (2006). Restoration of wetlands in the Mississippi-Ohio-Missouri (MOM) River Basin: Experience and needed research. Ecological Engineering, 26(1), 55-69. https://doi.org/10.1016/j.ecoleng.2005.09.005

Mitsch, W. J., & Gosselink, J. G. (2007). Wetlands, (5th ed.). Hoboken, NJ: John Wiley & Sons, Inc.

Mladenoff, D. J., Sickley, T. A., Haight, R. G., & Wydeven, A. P. (1995). A regional landscape analysis and prediction of favorable gray wolf habitat in the northern Great Lakes region. Conservation Biology, 9(2), 279-294.

Montgomery, D.R., & Buffington, J.M. (1998), Channel processes, classification, and response. In R. Naiman, and R. Bilby (Eds.), River Ecology and Management, (pp.13-42). New York: Springer.

Montgomery, D. R., & Macdonald, L. H. (2002). Diagnostic approach to stream channel assessment and monitoring. JAWRA Journal of the American Water Resources Association, 38(1), 1-16.

Moore, I. D., & Larson, C. L. (1979). Effects of drainage projects on surface runoff from small depressional watersheds in the north central region. St. Paul, MN: University of Minnesota, Water Resources Research Center.

Morse, C. C., Huryn, A. D., & Cronan, C. (2003). Impervious surface area as a predictor of the effects of urbanization on stream insect communities in Maine, U.S.A. Environmental Monitoring and Assessment, 89(1), 95-127. https://doi.org/10.1023/A:1025821622411

Mosley, M. P. (1981). Semi-determinate hydraulic geometry of river channels, South Island, New Zealand. Earth Surface Processes and Landforms, 6, 127-137.

Moyle, J. B. (1956). Relationships between the chemistry of Minnesota surface waters and wildlife management. The Journal of Wildlife Management, 20(3), 303-320. https://doi.org/10.2307/3796967

Murdoch, W. (1999). Biodiversity and ecosystem functioning: maintaining natural life support processes. Bulletin of the Ecological Society of America, 4. https://doi.org/10.1890/0012-9623(2005)86[249b:IIE]2.0.CO;2

N

Naeem, S., Chapin, F. S., Costanza, R., Ehrlich, P. R., Golley, F. B., Hooper, D. U., ... Tilman, D. (1999). Biodiversity and ecosystem functioning: maintaining natural life support processes. Issues in Ecology, 4. https://doi.org/10.1890/0012-9623(2005)86[249b:IIE]2.0.CO;2

Naiman, R. J., Decamps, H., & Pollock, M. (1993). The role of riparian corridors in maintaining regional biodiversity. Ecological Applications, 3(2), 209-212.

Nakayama, T., & Watanabe, M. (2008). Missing role of groundwater in water and nutrient cycles in the shallow eutrophic Lake Kasumigaura, Japan. Hydrological Processes, 22, 1150-1172.

Nangia, V., Gowda, P. H., Mulla, D. J., & Sands, G. R. (2005). Water quality modeling of fertilizer management impacts on nitrate losses in tile drains at the field scale. Journal of Environmental Quality, 37(2), 296-307. https://doi.org/10.2134/jeq2007.0224

Nerbonne, B. A., & Vondracek, B. (2001). Effects of local land use on physical habitat, benthic macroinvertebrates, and fish in the Whitewater River, Minnesota, USA. Environmental Management, 28(1), 87-99. https://doi.org/10.1007/s002670010209

Newcombe, C. P., & Jensen, J. O. (1996). Channel suspended sediment and fisheries: A synthesis for quantitative assessment of risk and impact. North American Journal of Fisheries Management, 16(4), 693-727.

Nilsson, C., & Berggren, K. (2000). Alterations of Riparian Ecosystems Caused by River Regulation. BioScience, 50(9), 783. https://doi.org/10.1641/0006-3568(2000)050[0783:AORECB]2.0.CO;2

Nolan, B. T., Hitt, K. J., & Ruddy, B. C. (2002). Probability of nitrate contamination of recently recharged groundwaters in the conterminous United States. Environmental Science and Technology, 36(10), 2138-2145. https://doi.org/10.1021/es0113854

Norton, S. B., Cormier, S. M., Smith, M., & Jones, R. C. (2000). Can biological assessments discriminate among types of stress? A case study from the eastern Corn Belt plains ecoregion. Environmental Toxicology and Chemistry, 19(4 II), 1113-1119. Retrieved from http://www.scopus.com/inward/record.url?eid=2-s2.0-0034024873&partnerID=40&md5=2b03c4a47cdd6e0119b5b056730eb16f

Noss, R. F. (1990). Indicators for Monitoring Biodiversity : A Hierarchical Approach. Conservation Biology, 4(4), 355-364.

Novacek, M. J., & Cleland, E. E. (2001). The current biodiversity extinction event: Scenarios for mitigation and recovery. Proceedings of the National Academy of Sciences of the United States of America, 98(10), 5466-5470. https://doi.org/10.1073/pnas.091093698

Novak, J. M., Stone, K. C., Szogi, A. A., Watts, D. W., & Johnson, M. H. (2004). Wetland aquatic processes: Dissolved phosphorus retention and release from a coastal plain in-stream wetland. Journal of Environment Quality, 33, 394-401. https://doi.org/10.2134/jeq2004.3940

Novotny, E. V., Murphy, D., & Stefan, H. G. (2008). Increase of urban lake salinity by road deicing salt. Science of the Total Environment, 406(1-2), 131-144. https://doi.org/10.1016/j.scitotenv.2008.07.037

Novotny, E. V., & Stefan, H. G. (2007). Stream flow in Minnesota: Indicator of climate change. Journal of Hydrology, 334(3-4), 319-333. https://doi.org/10.1016/j.jhydrol.2006.10.011

O

Ode, P. R., Rehn, A. C., & May, J. T. (2005). A quantitative tool for assessing the integrity of southern coastal California streams. Environmental Management, 35(4), 493-504. https://doi.org/10.1007/s00267-004-0035-8

Ojakangas, R.W., & Matsch, C.L. (1982). Minnesota’s Geology. Minneapolis, MN: University of Minnesota Press.

Olden, J. D., & Poff, N. L. (2003). Redundancy and the choice of hydrologic indices for characterizing streamflow regimes. River Research and Applications, 19(2), 101-121. https://doi.org/10.1002/rra.700

Olmanson, L. G., Bauer, M. E., & Brezonik, P. L. (2008). A 20-year Landsat water clarity census of Minnesota’s 10,000 lakes. Remote Sensing of Environment, 112(11), 4086-4097. https://doi.org/10.1016/j.rse.2007.12.013

Olmanson, L. G., Kloiber, S. M., Brezonik, P. L., & Bauer, M. E. (n.d.). Use of satellite imagery for water clarity assessment of Minnesota’s 10,000. St. Paul, Minnesota: University of Minnesota.

Oquist, K. A., Strock, J. S., & Mulla, D. J. (2006). Influence of Alternative and Conventional Management Practices on Soil Physical and Hydraulic Properties. Vadose Zone Journal, 5(1), 356-364. https://doi.org/10.2136/vzj2005.0054

Oquist, K. a, Strock, J. S., & Mulla, D. J. (2007). Influence of alternative and conventional farming practices on subsurface drainage and water quality. Journal of Environmental Quality, 36(4), 1194-204. https://doi.org/10.2134/jeq2006.0274

P

Palmer, M. a, Hakenkamp, C. C., & Nelson-Baker, K. (1997). Ecological heterogeneity in streams: why variance matters. Journal of the North American Benthological Society, 16(1), 189-202. https://doi.org/10.2307/1468251

Pardo, L. H., Driscoll, C. T., & Likens, G. E. (1995). Patterns of nitrate loss from a chronosequence of clear-cut watersheds. In Water, Air, and Soil Pollution (Vol. 85, pp. 1659-1664). https://doi.org/10.1007/BF00477218

Parr, L. B., & Mason, C. F. (2003). Long-term trends in water quality and their impact on macroinvertebrate assemblages in eutrophic lowland rivers. Water Research, 37(12), 2969-2979. https://doi.org/10.1016/S0043-1354(03)00115-5

Pascual, M. a., Cussac, V., Dyer, B., Soto, D., Vigliano, P., Ortubay, S., & Macchi, P. (2007). Freshwater fishes of Patagonia in the 21st Century after a hundred years of human settlement, species introductions, and environmental change. Aquatic Ecosystem Health & Management, 10(2), 212-227. https://doi.org/10.1080/14634980701351361

Passy, S. I., Bode, R. W., Carlson, D. M., & Novak, M. a. (2004). Comparative environmental assessment in the studies of benthic diatom, macroinvertebrate, and fish communities. International Review of Hydrobiology, 89(2), 121-138. https://doi.org/10.1002/iroh.200310721

Paszkowski, C. A., & Tonn, W. M. (2000). Community concordance between the fish and aquatic birds of lakes in northern Alberta, Canada; the relative importance of environmental and biotic factors. Freshwater Biology, 43, 421-437.

Patrick, R., Palms, J., Kreeger, D., & Harris, C. (2007). Twenty-five-year study of radionuclides in the Susquehanna river via periphyton biomonitors. Health Physics, 92(1), 1-9. https://doi.org/10.1097/01.HP.0000228934.94734.3f

Patty, S. S., Roth, N., & Mountain, D. (1999). Maryland, the Power Plant Research Program, and the Chesapeake Bay watershed. Science of the Total Environment, 240(1-3), 171-188. https://doi.org/10.1016/S0048-9697(99)00323-X

Paul, M. J., & Meyer, J. L. (2001). Streams in the Urban Landscape. Annual Review of Ecology and Systematics, 32, 333-365.

Pearl, M. C. (2000). Research Techniques in Animal Ecology Methods and Cases in Conservation Science. The Journal of Wildlife Management, 65(3), 599. https://doi.org/10.2307/3803113

Pereira, H. M., & David Cooper, H. (2006). Towards the global monitoring of biodiversity change. Trends in Ecology and Evolution, 21(3), 123-129. https://doi.org/10.1016/j.tree.2005.10.015

Petts, G. E. (1984). Impounded Rivers: Perspectives for Ecological Management. Chichester, UK: Wiley.

Picman, J., Pribil, S., Isabelle, A., Icman, J. A. P., Ribil, S. T. P., & Sabelle, a N. I. (2002). Antipredation value of colonial nesting in yellow-headed blackbirds. The Auk, 119(2), 461-472. https://doi.org/10.1642/0004-8038(2002)119

Pimm, S., Raven, P., Peterson, A., Şekercioğlu, Ç. H., & Ehrlich, P. R. (2006). Human impacts on the rates of recent, present, and future bird extinctions. Proceedings of the National Academy of Sciences, 103(29), 10941-10946. https://doi.org/10.1073/pnas.0604181103

Poff, N. L., Allan, J. D., Bain, M. B., Karr, J. R., Prestegaard, K. L., Richter, B. D., ... Stromberg, J. C. (1997). The Natural Flow Regime: A paradigm for river conservation and restoration. BioScience, 47(11), 769-784.

Poff, N. L., Bledsoe, B. P., & Cuhaciyan, C. O. (2006). Hydrologic variation with land use across the contiguous United States: Geomorphic and ecological consequences for stream ecosystems. Geomorphology, 79(3-4), 264-285. https://doi.org/10.1016/j.geomorph.2006.06.032

Poff, N. L. (2009). Managing for Variability to Sustain Freshwater Ecosystems. Journal of Water Resources Planning and Management, 135, 1-4. https://doi.org/10.1061/(ASCE)0733-9496(2009)135:1(1)

Poff, N. L., & Zimmerman, J. K. H. (2010). Ecological responses to altered flow regimes: A literature review to inform the science and management of environmental flows. Freshwater Biology, 55(1), 194-205. https://doi.org/10.1111/j.1365-2427.2009.02272.x

Porcher, E. (1989). Groundwater contamination susceptibility in Minnesota. Minnesota Pollution Control Agency. St. Paul, MN.

Power, M. E., Parker, G., Dietrich, W. E., & Sun, A. (1995). How does floodplain width affect floodplain river ecology? A preliminary exploration using simulations. Geomorphology, 13(1-4), 301-317. https://doi.org/10.1016/0169-555X(95)00039-8

Prendergast, J. R., & Eversham, B. C. (1997). Species richness covariance in higher taxa: Empirical tests of the biodiversity indicator concept. Ecography, 202, 210-217. https://doi.org/10.1111/j.1600-0587.1997.tb00363.x

R

Ra, J. S., Kim, S. D., Chang, N. I., & An, K.-G. (2007). Ecological health assessments based on whole effluent toxicity tests and the index of biological integrity in temperate streams influenced by wastewater treatment plant effluents. Environmental Toxicology and Chemistry, 26, 2010-2018. https://doi.org/10.1897/06-542R.1

Rapport, D. J., Regier, H. A., & Hutchinson, T. C. (1985). Ecosystem behavior under stress. The American Naturalist, 125(5), 617-640.

Reckhow, K. H., Beaulac, M. N., & Simpson, J. T. (1980). Modeling phosphorous loading and lake response under uncertainty: A manual and compilation of export coefficients. Washington, D.C.

Reuter, R. J., & Bell, J. C. (2003). Hillslope hydrology and soil morphology for a wetland basin in south-central Minnesota. Soil Science Society of America Journal, 67, 365. https://doi.org/10.2136/sssaj2003.0365

Richards, K. S. (1982). Rivers: Form and Process in Alluvial Channels. London, England: Methuen & Company.

Richter, B. D., Baumgartner, J. V, Powell, J., & Braun, D. P. (1996). A method for assessing hydrologic alteration within ecosystems. Conservation Biology, 10(4), 1163-1174. https://doi.org/10.2307/2387152

Richter, B.D., Davis, M.M., Apse, C., & Konrad, C. (2012). A presumptive standard for environmental flow protection. River Research and Applications 28:1312–1321.

Ricklefs, R. E. (1987). Community diversity: Relative roles of local and regional processes. Science, 235, 167-171.

Riva, C., Binelli, A., & Provini, A. (2008). Evaluation of several priority pollutants in zebra mussels (Dreissena polymorpha) in the largest Italian subalpine lakes. Environmental Pollution, 151(3), 652-662. https://doi.org/10.1016/j.envpol.2007.03.016

Robbins, C. S., Sauer, J. R., Greenberg, R. S., & Droege, S. (1989). Population declines in north american birds that migrate to the neotropics. Proceedings of the National Academy of Sciences of the United States of America, 86(19), 7658-7662.

Rodrigues, A. S. L., & Brooks, T. M. (2007). Shortcuts for biodiversity conservation planning: The effectiveness of surrogates. Annual Review of Ecology, Evolution, and Systematics, 38(1), 713-737. https://doi.org/10.1146/annurev.ecolsys.38.091206.095737

Roni, P., Quimby, E., & American Fisheries Society. (2005). Monitoring stream and watershed restoration. Bethesda, MD: American Fisheries Society.

Rosgen, D. L. (1994). A classification of natural rivers. Catena, 22(3), 169-199. https://doi.org/10.1016/0341-8162(94)90001-9

Rosgen, D. L. (1996). Applied River Morphology. Pagosa Springs, CO: Wildland Hydrology Books.

Rosgen, D. L. (2006). Watershed assessment of river stability and sediment supply. Fort Collins, CO: Wildland Hydrology Books.

Roth, N. E., Allan, J. D., & Erickson, D. L. (1996). Landscape influences on stream biotic integrity assessed at multiple spatial scales. Landscape Ecology, 11(3), 141-156.

Rothermel, B. B., & Semlitsch, R. D. (2002). An experimental investigation of landscape resistance of forest versus old-field habitats to emigrating juvenile amphibians. Conservation Biology, 16(5), 1324-1332. https://doi.org/10.1046/j.1523-1739.2002.01085.x

S

Saam, H., Mark Powell, J., Jackson-Smith, D. B., Bland, W. L., & Posner, J. L. (2005). Use of animal density to estimate manure nutrient recycling ability of Wisconsin dairy farms. Agricultural Systems, 84(3), 343-357. https://doi.org/10.1016/j.agsy.2004.06.020

Sabo, J. L., Sponseller, R., Dixon, M., Gade, K., Harms, T., Heffernan, J., ... Welter, J. (2005). Riparian zones increase regional species richness by harboring different, not more, species. Ecology, 86(1), 56-62. https://doi.org/10.1890/04-0668

Sandberg, J. Minnesota Pollution Control Agency, Environmental Analysis and Outcomes Division. (2014). Development of a fish-based index of biological integrity for Minnesota’s rivers and streams. St. Paul, MN: Author.

Sandin, L. (2009). The effects of catchment land-use, near-stream vegetation, and river hydromorphology on benthic macroinvertebrate communities in a south-Swedish catchment. Fundamental and Applied Limnology, 174(1), 75-87. https://doi.org/10.1127/1863-9135/2009/0174-0075

Sands, G., & Busman, L. (2002). Agricultural Drainage: Issues and Answers. University of Minnesota Extension Services. https://doi.org/10.1080/10645579309444702

Satterlund, D. R. (1972). Wildland Watershed Management. New York: Ronald Press.

Schiff, R., & Benoit, G. (2007). Effects of impervious cover at multiple spatial scales on coastal watershed streams. JAWRA Journal of the American Water Resources Association, 43(3), 712-730.

Schilling, K. E., Jha, M. K., Zhang, Y.-K., Gassman, P. W., & Wolter, C. F. (2008). Impact of land use and land cover change on the water balance of a large agricultural watershed: Historical effects and future directions. Water Resources Research, 44(7), 1-12. https://doi.org/10.1029/2007WR006644

Schlesinger, W. H. (1991). Biogeochemistry - An Analysis of Global Change. San Diego, CA: Academic Press.

Schlosser, I. J., & Karr, J. R. (1981). Riparian vegetation and channel morphology impact on spatial patterns of water quality in agricultural watersheds. Environmental Management, 5(3), 233-243. https://doi.org/10.1007/BF01873282

Schlosser, I. J., & Karr, J. R. (1981). Water quality in agricultural watersheds: Impact of riparian vegetation during base flow. JAWRA Journal of the American Water Resources Association, 17(2), 233-240. https://doi.org/10.1111/j.1752-1688.1981.tb03927.x

Schlosser, I. J. (1991). Stream Fish Ecology - a Landscape Perspective. Bioscience, 41(10), 704-712. https://doi.org/10.2307/1311765

Schoonover, J. E., Lockaby, B. G., & Pan, S. (2005). Changes in chemical and physical properties of stream water across an urban-rural gradient in western Georgia. Urban Ecosystems, 8(1), 107-124. https://doi.org/10.1007/s11252-005-1422-5

Schouten, M. A., Verweij, P. A., Barendregt, A., Kleukers, R. M. J. C., Kalkman, V. J., & De Ruiter, P. C. (2009). Determinants of species richness patterns in the Netherlands across multiple taxonomic groups. Biodiversity and Conservation, 18(1), 203-217. https://doi.org/10.1007/s10531-008-9467-4

Serveiss, V. B. (2002). Applying ecological risk principles to watershed assessment and management. Environmental Management, 29(2), 145-154. https://doi.org/10.1007/s00267-001-0025-z

Sherer, B. M., Miner, J. R., Moore, J. A., & Buckhouse, J. C. (1988). Resuspending organisms from a rangeland stream bottom. Trans. ASAE, 31, 1217-1222.

Shisler, J. K., Jordan, R. A., & Wargo, R. N. New Jersey Agricultural Experiment Station, Mosquito Research and Control (1987). Coastal wetlands buffer delineation (Vol. P-40503-01). New Brunswick, NJ: Author.

Slonecker, E. T., Jennings, D. B., & Garofalo, D. (2001). Remote sensing of impervious surfaces: A review. Remote Sensing Reviews, 20(3), 227-255. https://doi.org/10.1080/02757250109532436

Simon, T. P., Stewart, P. M., & Rothrock, P. E. (2001). Development of multimetric indices of biotic integrity for riverine and palustrine wetland plant communities along Southern Lake Michigan. Aquatic Ecosystem Health & Management, 4(3), 293-309.

Smith, A. J., Bode, R. W., & Kleppel, G. S. (2007). A nutrient biotic index (NBI) for use with benthic macroinvertebrate communities. Ecological Indicators, 7(2), 371-386. https://doi.org/10.1016/j.ecolind.2006.03.001

Snyder, M. N., Goetz, S. J., & Wright, R. K. (2005). Stream health rankings predicted by satellite derived land cover metrics. JAWRA Journal of the American Water Resources Association, June, 659-677. https://doi.org/10.1111/j.1752-1688.2005.tb03762.x

Soil Survey Staff, United States Department of Agriculture, Natural Resources Conservation Service. (2017). Soil Survey Geographic (SSURGO) Database. Retrieved from https://sdmdataaccess.sc.egov.usda.gov

Soil Survey Staff, United States Department of Agriculture, Natural Resources Conservation Service. (2014). U.S. General Soil Map (STATSGO2). Retrieved from https://sdmdataaccess.sc.egov.usda.gov

Southeastern Wisconsin Regional Planning Commission. (2010). Managing the Water’s Edge: Making Natural Connections. Retrieved from www.sewrpc.org

Sovell, L. A., Vondracek, B., Frost, J. A., & Mumford, K. G. (2000). Impacts of rotational grazing and riparian buffers on physicochemical and biological characteristics of Southeastern Minnesota, USA, streams. Environmental Management, 26(6), 629-641. https://doi.org/10.1007/s002670010121

Stanford, J. A., & Ward, J. V. (1979). Stream Regulation in North America. The Ecology of Regulated Streams, (pp. 215-236). New York, NY: Plenum Press.

Stanford, J. A., & Ward, J. V. (1988). The hyporheic habitat of river ecosystems. Nature, 335, 64-66. https://doi.org/10.1038/332141a0

Staton, S. K., Dextrase, A., Metcale-Smith, J. L., Maio, J. Di, Nelson, M., Parish, J., ... Holm, E. (2003). Status and trends of Ontario’s Sydenham River ecosystem in relation to aquatic species at risk. Environmental Monitoring and Assessment, 88, 283-310.

Steedman, R. J. (1988). Modification and assessment of an index of biotic integrity to quantify stream quality in southern Ontario. Canadian Journal of Fisheries and Aquatic Sciences, 45, 492-501. https://doi.org/10.1139/f88-059

Stepenuck, K. F., Crunkilton, R. L., Bozek, M. a., & Wang, L. (2008). Comparison of macroinvertebrate-derived stream quality metrics between snag and riffle habitats. JAWRA Journal of the American Water Resources Association, 44(3), 670-678.

Stewart, J. S., Wang, L., Lyons, J., Horwatich, J. A., & Bannerman, R. (2001). Influences of watershed, riparian-corridor, and reach-scale characteristics on aquatic biota in agricultural watersheds. JAWRA Journal of the American Water Resources Association, 37(6), 1475-1487. https://doi.org/10.1111/j.1752-1688.2001.tb03654.x

Stewart-Oaten, A., Murdoch, W. W., Nisbet, R. M., & Fujiwara, M. (2000). Limitations of Multi-Metric Indices, Including the Index of Biotic Integrity (IBI). Pacific Estaurine Ecosystem Indicator R

Sutherland, G. D., Harestad, A. S., Price, K., & Lertzman, K. P. (2000). Scaling of natal dispersal distances in terrestrial birds and mammals. Ecology and Society, 4(1). https://doi.org/16\nArtn 16

T

Taylor, P. D., Fahrig, L., Henein, K., & Merriam, G. (1993). Connectivity is a vital element of landscape structure. Oikos, 68(3), 571-573.

Taylor, P. D., Fahrig, L., & With, K. (2006). Landscape connectivity: A return to the basics. In K. R. Crooks & M. Sanjayan (Eds.), Connectivity Conservation, (pp. 29-43). Cambridge: Cambridge University Press.

Temple, S. A., & Cary, J. R. (1988). Modeling dynamics of habitat-interior bird populations in fragmented landscapes. Conservation Biology, 2(4), 340-347. Retrieved from http://www.jstor.org/stable/2386293%5Cnhttp://about.jstor.org/terms

The Federal Interagency Stream Restoration Working Group. (1998). Stream corridor restoration: Principles, processes and practices. Washington D.C.: U.S. Department of Agriculture, Natural Resource Conservation Service. Retrieved from https://www.nrcs.usda.gov/Internet/FSE_DOCUMENTS/stelprdb1044574.pdf

The Nature Conservancy, Conservation Gateway. (2007). Indicators of hydrologic alteration (Program). Arlington, VA: The Nature Conservancy.

The Nature Conservancy, Conservation Gateway. (2007). Indicators of hydrologic alteration (Computer Software). Arlington, VA: The Nature Conservancy. Retrieved from https://www.conservationgateway.org/ConservationPractices/Freshwater/EnvironmentalFlows/MethodsandTools/IndicatorsofHydrologicAlteration/

Thoma, D. P., Gupta, S. C., Bauer, M. E., & Kirchoff, C. E. (2005). Airborne laser scanning for riverbank erosion assessment. Remote Sensing of Environment, 95(4), 493-501. https://doi.org/10.1016/j.rse.2005.01.012

Thorn, W. C., & Anderson, C. S. (1999). A provisional classification of Minnesota rivers with associated fish communities. Minnesota Department of Natural Resources, Section of Fisheries (Vol. 153). St. Paul, Minnesota.

Tiedemann, A. R., Higgins, D. A., Quigley, T. M., Sanderson, H. R., & Bohn, C. C. (1988). Bacterial water quality responses to four grazing strategies-comparisons with Oregon standards. Journal of Environment Quality, 17(3), 492-498. https://doi.org/10.2134/jeq1988.00472425001700030025x

Tiedemann, A. R., Higgins, D. A., Quigley, T. M., Sanderson, H. R., & Marx, D. B. (1987). Responses of fecal coliform in stream water to four grazing strategies. Journal of Range Management, 40(4), 322-329. https://doi.org/10.2307/3898729

Tilman, D., Knops, J., Wedin, D., Reich, P., Ritchie, M., & Siemann, E. (1997). The influence of functional diversity and composition on ecosystem processes. Science, 277(5330), 1300-1302.

Tilman, D., Wedin, D., & Knops, J. (1996). Productivity and sustainability influenced by biodiversity in grassland ecosystems. Nature, 379, 718-720. https://doi.org/10.1098/rspb.2010.1923

Townsend, P. A. (1997). Environmental gradients and vegetation patterns on the Roanoke River floodplain, North Carolina (Doctoral dissertation). Retrieved from The SAO/NASA Astrophysics Data System (Publication Number: AAI9803660).

Townsend, P. A., Eshleman, K. N., & Welcker, C. (2004). Remote sensing of gypsy moth defoliation to assess variations in stream nitrogen concentrations. Ecological Applications, 14(2), 504-516. https://doi.org/10.1890/02-5356

Trush, W. J., McBain, S. M., & Leopold, L. B. (2000). Attributes of an alluvial river and their relation to water policy and management. Proceedings of the National Academy of Sciences of the United States of America, 97(22), 11858-11863. https://doi.org/10.1073/pnas.97.22.11858

Tucker, G. E., & Bras, R. L. (1998). Hillslope processes, drainage density, and landscape morphology. Water Resources Research, 34(10), 2751-2764.

U

Udawatta, R. P., Anderson, S. H., Gantzer, C. J., & Garrett, H. E. (2008). Influence of prairie restoration on CT-measured soil pore characteristics. Journal of Environmental Quality, 37(1), 219-228. https://doi.org/10.2134/jeq2007.0227

V

Vaché, K. B., Eilers, J. M., & Santelmann, M. V. (2002). Water quality modeling of alternative agricultural scenarios in the U.S. Corn Belt. JAWRA Journal of the American Water Resources Association, 38(3), 773-787.

VanBuren, P., & Wells, J. (2007). Use of Minnesota’s Renewable water resources: Moving toward sustainability. St. Paul, MN: Minnesota Environmental Quality Board.

Van Kirk, R. W., & Naman, S. W. (2008). Relative effects of climate and water use on base-flow trends in the lower Klamath Basin. JAWRA Journal of the American Water Resources Association, 44(4), 1035-1052. https://doi.org/10.1111/j.1752-1688.2008.00212.x

Van Snik Gray, E., & Stauffer, J. R. (1999). Comparative microhabitat use of ecologically similar benthic fishes. Environmental Biology of Fishes, 56(4), 443-453. https://doi.org/10.1023/A:1007536019444

Vannote, R. L., Minshall, W. G., Cummins, K. W., Sedell, J. R., & Cushing, C. E. (1980). The river continuum concept. Canadian Journal of Fisheries and Aquatic Sciences, 37(1), 130-137.

Verry, E. S., Lewis, J. R., & Brooks, K. N. (1983). Aspen Clearcutting increases Snowmelt and Storm Flow Peaks in North Central Minnesota. Water Resources Bulletin, 19(1), 59-67.

Verry, E. S. (1986). Forest Harvesting and Water: the Lake States Experience. JAWRA Journal of the American Water Resources Association, 22(6), 1039-1047. https://doi.org/10.1111/j.1752-1688.1986.tb00775.x

Vignieri, S. N. (2005). Streams over mountains: Influence of riparian connectivity on gene flow in the Pacific jumping mouse (Zapus trinotatus). Molecular Ecology, 14(7), 1925-1937. https://doi.org/10.1111/j.1365-294X.2005.02568.x

Vivoni, E. R., & Richards, K. T. (2005). Integrated use of GIS-based field sampling and modeling for hydrologic and water quality studies. Journal of Hydroinformatics, 7(4), 235-250.

Vörösmarty, C. J., McIntyre, P. B., Gessner, M. O., Dudgeon, D., & Prusevich, A. (2010). Global Threats to Human Water Security and River Biodiversity. Nature, 467(7315), 555-561.

Vos, C. C., Verboom, J., Opdam, P. F., & Ter Braak, C. J. (2001). Toward ecologically scaled landscape indices. The American Naturalist, 157(1), 24-41.

W

Walsh, C. J., Roy, A. H., Feminella, J. W., Cottingham, P. D., Groffman, P. M., & Morgan, R. P. (2005). The urban stream syndrome: current knowledge and the search for a cure. Journal of the North American Benthological Society, 24(3), 706. https://doi.org/10.1899/0887-3593(2005)024\[0706:TUSSCK\]2.0.CO;2

Walsh, C. J., Waller, K. a., Gehling, J., & Mac Nally, R. (2007). Riverine invertebrate assemblages are degraded more by catchment urbanization than by riparian deforestation. Freshwater Biology, 52(3), 574-587. https://doi.org/10.1111/j.1365-2427.2006.01706.x

Wang, L., & Kanehl, P. (2003). Influences of watershed urbanization and instream habitat on macroinvertebrates in cold water streams. JAWRA Journal of the American Water Resources Association, 39(5), 1181-1196. Retrieved from http://onlinelibrary.wiley.com/doi/10.1111/j.1752-1688.2003.tb03701.x/abstract%5Cnpapers2://publication/uuid/72EA3A97-3A18-40B9-AC97-C2BC7F7D4727

Wang, L., Lyons, J., Kanehl, P., & Gatti, R. (1997). Influence of watershed land use on habitat quality and biotic integrity in Wisconsin streams. Fisheries, 22(6), 7-12.

Wang, L., Lyons, J., Kanehl, P., & Bannerman, R. (2001). Impacts on stream habitat and fish across multiple spatial scales. Environmental Management, 28(2), 255-266.

Wang, L., Lyons, J., & Kanehl, P. (2002). Effects of watershed best management practices on habitat and fish in Wisconsin streams. JAWRA Journal of the American Water Resources Association, 38(3), 663-680. Retrieved from http://dx.doi.org/10.1111/j.1752-1688.2002.tb00988.x

Wang, L., Lyons, J., Rasmussen, P., Seelbach, P., Simon, T., Wiley, M., ... Stewart, P. M. (2003). Watershed, reach, and riparian influences on stream fish assemblages in the Northern Lakes and Forest Ecoregion, U.S.A. Canadian Journal of Fisheries and Aquatic Sciences, 60, 491-505. https://doi.org/10.1139/f03-043

Wang, L., Lyons, J., & Kanehl, P. (2006). Habitat and fish responses to multiple agricultural best management practices in a warm water stream. JAWRA Journal of the American Water Resources Association, 42(4), 1047-1062.

Wang, L., Robertson, D. M., & Garrison, P. J. (2007). Linkages between nutrients and assemblages of macroinvertebrates and fish in wadeable streams: Implication to nutrient criteria development. Environmental Management, 39(2), 194-212. https://doi.org/10.1007/s00267-006-0135-8

Wang, L., Brenden, T., Seelbach, P., Cooper, A., Allan, D., Clark, R., & Wiley, M. (2008). Landscape based identification of human disturbance gradients and reference conditions for Michigan streams. Environmental Monitoring and Assessment, 141(1-3), 1-17. https://doi.org/10.1007/s10661-006-9510-4

Ward, J.V., & Standford, J.A. (1979). Stream Regulation in North America. In The Ecology of Regulated Streams (pp 215-236). New York, NY: Springer.

Ward, J. V, Journal, S., American, N., Society, B., & Ward, J. V. (2008). The Four-Dimensional Nature of Lotic Ecosystems. Journal of the North American Benthological Society, 8(1), 2-8.

Ward, J. V, & Stanford, J. A. (1995). Ecological connectivity in alluvial river ecosystems and its disruption by flow regulation. Regulated Rivers: Research & Management, 11(1), 105-119. Retrieved from http://dx.doi.org/10.1002/rrr.3450110109

Ward, R. (1989). Hydrology of floods in Canada: a guide to planning and design. Ottawa, Ontario: National Research Council Canada.

Wardrop, D. H., Bishop, J. a., Easterling, M., Hychka, K., Myers, W., Patil, G. P., & Taillie, C. (2005). Use of landscape and land use parameters for classification and characterization of watersheds in the mid-Atlantic across five physiographic provinces. Environmental and Ecological Statistics, 12(2), 209-223.

Waters, T. F. (2000). Wildstream: A natural history of the free flowing river. St. Paul, MN: Riparian Press.

Watkins, R. Z., Chen, J., Pickens, J., & Brosofske, K. D. (2003). Effects of forest roads on understory plants in a managed hardwood landscape. Conservation Biology, 17(2), 411-419. https://doi.org/10.1046/j.1523-1739.2003.01285.x

Weigel, B. M., Wang, L., Rasmussen, P. W., Butcher, J. T., Stewart, P. M., Simon, T. P., & Wiley, M. J. (2003). Relative influence of variables at multiple spatial scales on stream macroinvertebrates in the Northern Lakes and Forest ecoregion, U.S.A. Freshwater Biology, 48(8), 1440-1461.

Welch, E. B., Jacoby, J. M., & May, C. W. (1998). Stream quality. In R. Naiman, and R. Bilby (Eds.), River Ecology and Management (pp.69-94). New York: Springer.

Weller, D. E., Jordan, T. E., & Correll, D. L. (1998). Heuristic models for material discharge from landscapes with riparian buffers. Ecological Applications, 8(4), 1156-1169.

White, M. D., & Greer, K. A. (2006). The effects of watershed urbanization on the stream hydrology and riparian vegetation of Los Peńasquitos Creek, California. Landscape and Urban Planning, 74(2), 125-138. https://doi.org/10.1016/j.landurbplan.2004.11.015

Wiens, J. a. (2002). Riverine landscapes: Taking landscape ecology into the water. Freshwater Biology, 47(4), 501-515.

Williams, D. T. (1977). Effects of Dam Removal: An Approach to Sedimentation. US Army Corps of Engineers: Hydrologic Engineering Center (Vol. TP-50). Retrieved from http://oai.dtic.mil/oai/oai?verb=getRecord&metadataPrefix=html&identifier=ADA106250

Wilson, D. J., & Droste, R. L. (2000). Design considerations for watershed management decision support systems. Water Quality Research Journal of Canada, 35(2), 163-188.

Winter, T. C., Harvey, J. W., Franke, O. L., & Alley, W. M. (1998). Ground water and surface water: A single resource. In USGS Publications. http://pubs.usgs.gov/circ/circ1139/pdf/circ1139.pdf

Winter, M., Johnson, D. H., Shaffer, J. A., Donovan, T. M., & Svedarsky, W. D. (2006). Patch size and landscape effects on density and nesting success of grassland birds. The Journal of Wildlife Management, 70(1), 158-172.

With, K. A., Cadaret, S. J., & Davis, C. (1999). Movement responses to patch structure in experimental fractal landscapes. Ecology, 80(4), 1340-1353.

Woltemade, C. J. (2000). Ability of Restored Wetlands to Reduce Nitrogen and Phosphorus Concentrations in Agricultural Drainage Water. Journal of Soil and Water Conservation, 55(3), 303-309.

Wood, P., & Armitage, P. (1997). Biological Effects of Fine Sediment in the Lotic Environment. Environmental Management, 21(2), 203-217. https://doi.org/10.1007/s002679900019

WOW. (2004). Turbidity, In Water on the web, monitoring Minnesota lakes on the internet and training water science technicians for the future, a national on-line curriculum using advanced technologies and real-time data. Duluth, MN: University of Minnesota-Duluth. Retrieved from www.waterontheweb.org

Wright, J. F. (1995). Development and use of a system for predicting the macroinvertebrate fauna in flowing waters. Australian Journal of Ecology, 20(1), 181-197. Retrieved from http://dx.doi.org/10.1111/j.1442-9993.1995.tb00531.x

Wu, J. (2013). Landscape sustainability science: Ecosystem services and human well-being in changing landscapes. Landscape Ecology, 28(6), 999?1023. https://doi.org/10.1007/s10980-013-9894-9

Wurbs, R. A., & Sisson, E. The Texas A&M Resources Institute, Texas Water Resources Institute. (1999). Technical Report: Comparative evaluation of methods for distributing naturalized streamflows from gaged to ungaged sites, (Vol. 179). College Station, TX: Author. Retrieved from http://repositories.tdl.org/twdl-ir/handle/1969.1/6151%5Cninternal-pdf://195/6151.html

X

Xian, G., & Crane, M. (2005). Assessments of urban growth in the Tampa Bay watershed using remote sensing data. Remote Sensing of Environment, 97(2), 203-215. https://doi.org/10.1016/j.rse.2005.04.017

Xian, G., Homer, C., Dewitz, J., Fry, J., Hossain, N., & Wickham, J. (2011). Change of impervious surface area between 2001 and 2006 in the conterminous United States. Photogrammetric Engineering & Remote Sensing, 77(8), 758-762.

Y

Yagow, G., Wilson, B., Srivastava, P., & Obropta, C. C. (2006). Use of biological indicators in TMDL assessment and implementation. Transactions of the ASABE, 49(4), 1023-1032.

Young, E. O., & Briggs, R. D. (2008). Phosphorus concentrations in soil and subsurface water: a field study among cropland and riparian buffers. Journal of Environmental Quality, 37(1), 69-78. https://doi.org/10.2134/jeq2006.0422

Yuan, F., & Bauer, M. E. (2007). Comparison of impervious surface area and normalized difference vegetation index as indicators of surface urban heat island effects in Landsat imagery. Remote Sensing of Environment, 106(3), 375-386. https://doi.org/10.1016/j.rse.2006.09.003

Z

Zampella, R. a., Procopio, N. a., Lathrop, R. G., & Dow, C. L. (2007). Relationship of land-use/land-cover patterns and surface-water quality in the Mullica River basin. JAWRA Journal of the American Water Resources Association, 43(3), 594-604. https://doi.org/10.1111/j.1752-1688.2007.00045.x

Zedler, J. B. (2003). Wetlands at your service: reducing impacts of agriculture at the watershed scale. Frontiers in Ecology and the Environment, 1(2), 65-72. https://doi.org/10.1890/1540-9295(2003)001[0065:WAYSRI]2.0.CO;2

Ziemer, R.R. & Lisle, T. E. (1998). Hydrology. In R. Naiman, and R. Bilby (Eds.), River Ecology and Management, (pp.43-68). New York: Springer.